Creates table of univariate regression results

The fmt_uni_regression function arguments are similar to the fmt_regression arguments. Review the fmt_uni_regression vignette for detailed examples.

fmt_uni_regression(data, method, y, method.args = NULL,
  formula = "{y} ~ {.x}", exponentiate = FALSE, label = NULL,
  show_yesno = NULL, conf.level = 0.95, beta_fun = fmt_beta,
  pvalue_fun = fmt_pvalue)

Arguments

data	Data frame to be used in univariate regression modeling. Data frame includes the outcome variable(s) and the independent variables.
method	Regression method (e.g. lm, glm, coxph, and more).
y	model outcome as a string (e.g. y = 'recurrence' or y = 'Surv(time, recur)')
method.args	List of additional arguments passed on to the regression function defined by method.
formula	String that becomes the model formula. Uses glue syntax. Default is "{y} ~ {.x}", where {y} is the dependent variable, and {.x} represents a single covariate. For a random intercept, the formula may be formula = "{y} ~ {.x} + (1 | gear)".
exponentiate	logical argument passed directly to broom::tidy(). Default is FALSE
label	list of labels to write in the output. list(age60 = "Age > 60")
show_yesno	Vector of names of categorical and factor variables that are c("No", "Yes"), c("no", "yes"), or c("NO", "YES") default to dichotomous printing (i.e. only Yes shown). To force both levels to be shown include the column name in show_yesno, e.g. show_yesno = c("highgrade", "female")
conf.level	confidence level passed directly to broom::tidy. Default is 0.95.
beta_fun	function to round and format beta coefficients. Default is fmt_beta
pvalue_fun	function to round and format p-values. Default is fmt_pvalue

Examples

fmt_uni_regression(
  trial,
  method = "glm",
  y = "response",
  method.args = list(family = binomial),
  exponentiate = TRUE
)
#> 
#> Variable                N                       OR                      95% CI                  p-value                
#> Treatment Randomization 191                                                                                            
#> Drug                                            Ref.                                                                   
#> Placebo                                         0.47                    0.26, 0.84              0.012                  
#> Age, yrs                183                     1.00                    0.98, 1.02              >0.9                   
#> Marker Level, ng/mL     183                     0.92                    0.65, 1.30              0.6                    
#> T Stage                 191                                                                                            
#> T1                                              Ref.                                                                   
#> T2                                              1.40                    0.63, 3.14              0.4                    
#> T3                                              0.63                    0.26, 1.50              0.3                    
#> T4                                              0.50                    0.22, 1.11              0.089                  
#> Grade                   191                                                                                            
#> I                                               Ref.                                                                   
#> II                                              0.60                    0.29, 1.25              0.2                    
#> III                                             0.76                    0.38, 1.51              0.4                    

# rounding pvalues to 2 decimal places, and adding global p-values
fmt_uni_regression(
  trial,
  method = "glm",
  y = "response",
  method.args = list(family = binomial),
  exponentiate = TRUE,
  pvalue_fun = function(x) fmt_pvalue(x, digits = 2)
) %>%
  add_global()
#> 
#> Variable                N                       OR                      95% CI                  p-value                
#> Treatment Randomization 191                                                                     0.011                  
#> Drug                                            Ref.                                                                   
#> Placebo                                         0.47                    0.26, 0.84                                     
#> Age, yrs                183                     1.00                    0.98, 1.02              0.90                   
#> Marker Level, ng/mL     183                     0.92                    0.65, 1.30              0.64                   
#> T Stage                 191                                                                     0.055                  
#> T1                                              Ref.                                                                   
#> T2                                              1.40                    0.63, 3.14                                     
#> T3                                              0.63                    0.26, 1.50                                     
#> T4                                              0.50                    0.22, 1.11                                     
#> Grade                   191                                                                     0.40                   
#> I                                               Ref.                                                                   
#> II                                              0.60                    0.29, 1.25                                     
#> III                                             0.76                    0.38, 1.51